{"serverId":"mcp-registry/com.olyport/pubmed","tools":[{"name":"find_related_articles","fixed":{"name":"find_related_articles","description":"Find articles related to a given PubMed article.\n\n    Uses NCBI's computed similarity to find conceptually related\n    papers. Useful for literature review expansion.\n\n    Args:\n        pmid: PubMed ID of the source article.\n        limit: Maximum related articles to return (default 10, max 50).\n    ","inputSchema":{"type":"object","title":"find_related_articlesArguments","required":["pmid"],"properties":{"pmid":{"type":"string","title":"Pmid"},"limit":{"type":"integer","title":"Limit","default":10}}},"annotations":{"readOnlyHint":true}},"changes":[{"kind":"annotations","detail":"Added readOnlyHint: true (inferred from the name).","verify":true}],"tokensBefore":157,"tokensAfter":157},{"name":"get_article_detail","fixed":{"name":"get_article_detail","description":"Get full details of a PubMed article by its PMID.\n\n    Returns title, all authors, complete abstract, MeSH terms,\n    publication types, journal info, and DOI.\n\n    Args:\n        pmid: PubMed ID (e.g. '39142850').\n    ","inputSchema":{"type":"object","title":"get_article_detailArguments","required":["pmid"],"properties":{"pmid":{"type":"string","title":"Pmid"}}},"annotations":{"readOnlyHint":true}},"changes":[{"kind":"annotations","detail":"Added readOnlyHint: true (inferred from the name).","verify":true}],"tokensBefore":116,"tokensAfter":116},{"name":"get_cited_by","fixed":{"name":"get_cited_by","description":"Find articles that cite a given PubMed article.\n\n    Useful for tracking the impact and follow-up research of a\n    key publication.\n\n    Args:\n        pmid: PubMed ID of the article to find citations for.\n        limit: Maximum citing articles to return (default 20, max 100).\n    ","inputSchema":{"type":"object","title":"get_cited_byArguments","required":["pmid"],"properties":{"pmid":{"type":"string","title":"Pmid"},"limit":{"type":"integer","title":"Limit","default":20}}},"annotations":{"readOnlyHint":true}},"changes":[{"kind":"annotations","detail":"Added readOnlyHint: true (inferred from the name).","verify":true}],"tokensBefore":146,"tokensAfter":146},{"name":"search_mesh","fixed":{"name":"search_mesh","description":"Search the MeSH vocabulary for standardized medical terms.\n\n    Find MeSH (Medical Subject Headings) descriptors to use in\n    precise PubMed searches. Returns MeSH IDs, preferred terms,\n    and scope notes.\n\n    Args:\n        term: Search term (e.g. 'diabetes', 'heart failure', 'opioid').\n        limit: Maximum results (default 10).\n    ","inputSchema":{"type":"object","title":"search_meshArguments","required":["term"],"properties":{"term":{"type":"string","title":"Term"},"limit":{"type":"integer","title":"Limit","default":10}}},"annotations":{"readOnlyHint":true}},"changes":[{"kind":"annotations","detail":"Added readOnlyHint: true (inferred from the name).","verify":true}],"tokensBefore":162,"tokensAfter":162},{"name":"search_pubmed","fixed":{"name":"search_pubmed","description":"Search PubMed for biomedical literature.\n\n    Find research articles, reviews, and clinical studies matching your\n    search terms. Supports PubMed query syntax including MeSH terms,\n    field tags, and boolean operators.\n\n    Args:\n        query: Search terms (e.g. 'diabetes prevention exercise',\n            'breast cancer[MeSH] AND immunotherapy', 'COVID-19 vaccine efficacy').\n        limit: Maximum results (default 20, max 100).\n        sort: Sort order - 'relevance', 'date', or 'author' (def","inputSchema":{"type":"object","title":"search_pubmedArguments","required":["query"],"properties":{"sort":{"type":"string","title":"Sort","default":"relevance"},"limit":{"type":"integer","title":"Limit","default":20},"query":{"type":"string","title":"Query"}}},"annotations":{"readOnlyHint":true}},"changes":[{"kind":"annotations","detail":"Added readOnlyHint: true (inferred from the name).","verify":true}],"tokensBefore":226,"tokensAfter":226}],"toolsChanged":5,"tokensSaved":0,"todo":[{"tool":"find_related_articles","params":["pmid","limit"]},{"tool":"get_article_detail","params":["pmid"]},{"tool":"get_cited_by","params":["pmid","limit"]},{"tool":"search_mesh","params":["term","limit"]},{"tool":"search_pubmed","params":["sort","limit","query"]}],"note":"Deterministic fixes. Changes marked verify need a human look before shipping (renames, inferred annotations, inferred types, removed text). Parameter descriptions in `todo` need to be written by someone who knows the API."}