# propaths-mcp

Source: https://glimind.com/server/pypi%2Fpropaths-mcp
Registry id: `pypi/propaths-mcp`
Status: unknown

## Install

```json
{
  "mcpServers": {
    "propaths-mcp": {
      "command": "uvx",
      "args": [
        "propaths-mcp"
      ]
    }
  }
}
```

Claude Code:

```sh
claude mcp add propaths-mcp -- uvx propaths-mcp
```

## Tools (11)

- `describe_schema`: The graph vocabulary + how to use the tools (offline)
- `export_network`: Export a protein's network as TSV / SIF / GraphML (Cytoscape, networkx)
- `get_highlights`: The best-evidenced interactions
- `get_interaction`: One interaction's full mechanism + evidence
- `get_interaction_between`: The interaction(s) between two proteins, in one call
- `get_pathway`: A pathway node with its lineage and member interactions
- `get_pathway_tree`: The full pathway scaffold (resolves pathway ids to names)
- `get_protein`: Compact interactome overview (the main entry point)
- `list_interaction_types`: The controlled vocabulary (edge kinds, types, directions) + counts
- `list_interactions`: Filtered/sorted headline rows
- `search_proteins`: Find a protein by symbol, alias, or name (start here)

Measured by Glimind (https://glimind.com): MCP handshake + tool list only, no tool is ever called. CC BY 4.0.