# ubcd-ibfg/PomBase MCP Server

Source: https://glimind.com/server/glama%2Fubcd-ibfg%2Fpombase-mcp-server
Registry id: `glama/ubcd-ibfg/pombase-mcp-server`
Status: unknown

## Tools (8)

- `pombase_compare_genes`: Fetches 2-10 genes in parallel and returns a side-by-side comparison (product, viability, characterisation status, ortholog counts).
- `pombase_get_gene_domains`: Protein domain/motif annotations: InterPro matches and transmembrane domain coordinates.
- `pombase_get_gene_go_annotations`: Gene Ontology annotations (Molecular Function, Biological Process, Cellular Component), optionally filtered to one aspect.
- `pombase_get_gene_interactions`: Curated physical and/or genetic interactions, with interactor names, evidence, and source references.
- `pombase_get_gene_orthologs`: Curated human and S. cerevisiae orthologs of the gene.
- `pombase_get_gene_phenotypes`: FYPO (Fission Yeast Phenotype Ontology) annotations plus the gene's deletion viability.
- `pombase_get_gene_summary`: Core identifying info for a gene: name, product, synonyms, genomic location, taxon, UniProt/BioGRID IDs, characterisation status, deletion viability.
- `pombase_search_genes`: Search/browse genes by name, systematic ID, or product keyword. Supports pagination.

Measured by Glimind (https://glimind.com): MCP handshake + tool list only, no tool is ever called. CC BY 4.0.